FastQCFastQC Report
Thu 5 Jan 2023
EGAF00006754437

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006754437
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22775343
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG292060.12823517081608826No Hit
CTCATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAA288410.12663256048437996No Hit
CCCCGGTCGTGTAGCGGTGAAAGTGGTTTGGTTTAGACGTCCGGGAATTG257850.11321454083040594No Hit
GTTTGGTTTAGACGTCCGGGAATTGCATCTGTTTTTAAGCCTAATGTGGG238690.10480193426724682No Hit
GTTTGGATGTAAAGTGAAATATTAGTTGGCGGATGAAGCAGATAGTGAGG238060.10452531933328073No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)