FastQCFastQC Report
Sat 22 Oct 2022
EGAF00006811090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006811090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3905887
Sequences flagged as poor quality0
Sequence length75
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCGACGGGGTATAGAAGCCACGAAGCTCGCAGGCCAATGGTTTTGAAGCCGAAAGCTAAACCGCAAAATTCA96420.24685814003323703No Hit
AGACGGTCGAAGAAGGTAATATCTTTGACAATACCGTGCCAAATAGATCTCTTTCCTCTTATGGCTTGCCTCAGC78010.19972415996673737No Hit
GTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGAGACAATTAAAAGCTTG63770.16326637201741884No Hit
GGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGACAAACGACGATATGCCTTGGGTAGCTGTAAGTAAGC47540.12171371061169972No Hit
GTTTATGGTGGATGTCTTGGAGCCAACCGGCGAAGAAGGCCGTGATAAGCTGCGAAAAGCTTCGGGGAGGAGCAC45410.11626040384680868No Hit
GGCATACGGTGGATGCCTTGGCGTCAGGAGTCGAAGAAGGACGCGATAAGCTGCGAAAAGCCGTGGGGAGCCGCA44570.11410980399586573No Hit
GGTTTATGGTGGATGTCTTGGAGCCAACCGGCGAAGAAGGCCGTGATAAGCTGCGAAAAGCTTCGGGGAGGAGCA44060.11280408265779322No Hit
GGTGGATGCCTTGGCGTTTCGAGTCGAAGAAGGACGCGATAAGCTGCGAAAAGCCATGGGGAGCCGCAAGTAGGC39170.10028451923980392No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)