FastQCFastQC Report
Sat 22 Oct 2022
EGAF00006811098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006811098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3862880
Sequences flagged as poor quality0
Sequence length75
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCGACGGGGTATAGAAGCCACGAAGCTCGCAGGCCAATGGTTTTGAAGCCGAAAGCTAAACCGCAAAATTCA95280.24665534523464358No Hit
AGACGGTCGAAGAAGGTAATATCTTTGACAATACCGTGCCAAATAGATCTCTTTCCTCTTATGGCTTGCCTCAGC78940.20435529967278301No Hit
GTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGAGACAATTAAAAGCTTG64170.16611957917408773No Hit
GGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGACAAACGACGATATGCCTTGGGTAGCTGTAAGTAAGC48450.12542455370086567No Hit
GGCATACGGTGGATGCCTTGGCGTCAGGAGTCGAAGAAGGACGCGATAAGCTGCGAAAAGCCGTGGGGAGCCGCA46160.11949633434121693No Hit
GTTTATGGTGGATGTCTTGGAGCCAACCGGCGAAGAAGGCCGTGATAAGCTGCGAAAAGCTTCGGGGAGGAGCAC44830.11605330737687942No Hit
GGTTTATGGTGGATGTCTTGGAGCCAACCGGCGAAGAAGGCCGTGATAAGCTGCGAAAAGCTTCGGGGAGGAGCA42730.11061694901213603No Hit
GGTGGATGCCTTGGCGTTTCGAGTCGAAGAAGGACGCGATAAGCTGCGAAAAGCCATGGGGAGCCGCAAGTAGGC38770.10036553038147704No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)