FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006816859

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006816859
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70106993
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGTGCGG2082404829.70323944716899No Hit
GGTATGCA1740971124.833059092978072No Hit
ACACCTTC1533138321.868550260028982No Hit
CTCGAAAT1532046121.85297121501132No Hit
CACGAAAT1008560.14386011392615283No Hit
TAGTGCGA1003600.1431526238759092No Hit
ACACCTTA985870.1406236322245343No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)