FastQCFastQC Report
Wed 31 May 2023
EGAF00006870747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006870747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64193664
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTAT4569050.7117602759051112TruSeq Adapter, Index 7 (97% over 38bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA958470.14930912807843466No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)