FastQCFastQC Report
Thu 29 Sep 2022
EGAF00006871117

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006871117
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51071805
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCTCCGGGGGCGGGGAGCG1390800.27232246833649215No Hit
GTCCGCGGGGCTCCGGGGGCGGGGAGCGGGGCGTGGGCGGGAGGAGGGGA1056540.20687344024751037No Hit
CCGGGATTCGGCGAGTGCTGCTGCCGGGGGGGCTGTAACACTCGGGGGGG834260.16335040439632006No Hit
GCCGCCGCCGCCGCCGCCGCCGCGCGCCGAGGAGGAGGGGGGAACGGGGG627030.12277419997198064No Hit
CACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCT624360.12225140662249943No Hit
CCGCGGGGCTCCGGGGGCGGGGAGCGGGGCGTGGGCGGGAGGAGGGGAGG606650.11878373987369352No Hit
GCCGCCGCCGCCGCCGCCGCGCGCCGAGGAGGAGGGGGGAACGGGGGGCG578240.11322098367191055No Hit
CCACTCTCGACTGCCGGCGACGGCCGGGTATGGGCCCGACGCTCCAGCGC519190.1016588311300139No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)