FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006871124

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006871124
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59999872
Sequences flagged as poor quality0
Sequence length150
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGCCGCGACCGGCTCCGGGACGGCTGGGAAGGCCCGGCGGGGAAGGTG1360840.2268071505219211No Hit
CGCTGGAGCGTCGGGCCCATACCCGGCCGTCGCCGGCAGTCGAGAGTGGA1237810.2063021067778278No Hit
CGCCGGCAGTCGAGAGTGGACGGGAGCGGCGGGGGCGGCGCGCGCGCGCG884480.147413647815782No Hit
CTCCTCCCCCGTCTCCGCCCCCCGGCCCCGCGTCCTCCCTCGGGAGGGCG849210.1415353019419775No Hit
CGGGAGCGGCGGGGGCGGCGCGCGCGCGCGCGCGTGTGGTGTGCGTCGGA843690.1406152999793066No Hit
CGGCAGTCGAGAGTGGACGGGAGCGGCGGGGGCGGCGCGCGCGCGCGCGC797610.13293528359527168No Hit
CTAGCCCTGAAAATGGATGGCGCTGGAGCGTCGGGCCCATACCCGGCCGT741390.12356526360589569No Hit
GTGCGTCGGAGGGCGGCGGCGGCGGCGGCGGCGGGGGTGTGTGGGGTCCT726140.12102359151699524No Hit
CCGCCCCCCGGCCCCGCGTCCTCCCTCGGGAGGGCGCGCGGGTCGGGGCG713450.1189085870049856No Hit
CCGGCCGTCGCCGGCAGTCGAGAGTGGACGGGAGCGGCGGGGGCGGCGCG677140.11285690742806918No Hit
AATGGATGGCGCTGGAGCGTCGGGCCCATACCCGGCCGTCGCCGGCAGTC662450.11040856887161359No Hit
TGGCGCTGGAGCGTCGGGCCCATACCCGGCCGTCGCCGGCAGTCGAGAGT657900.10965023392049904No Hit
CCGCGACCGGCTCCGGGACGGCTGGGAAGGCCCGGCGGGGAAGGTGGCTC652400.10873356529827263No Hit
CCCGTCTCCGCCCCCCGGCCCCGCGTCCTCCCTCGGGAGGGCGCGCGGGT632030.10533855805559052No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)