FastQCFastQC Report
Thu 29 Sep 2022
EGAF00006871185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006871185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59999842
Sequences flagged as poor quality0
Sequence length150
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCGCGGGGCTCCGGGGGCGGGGAGCGGGGCGTGGGCGGGAGGAGGGGA1059320.1765537982583354No Hit
CTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCTCCGGGGGCGGGGAGCG706240.11770697662837179No Hit
CACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCT645590.10759861667635724No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)