FastQCFastQC Report
Thu 29 Sep 2022
EGAF00006871291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006871291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59999838
Sequences flagged as poor quality0
Sequence length150
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCTCCGGGGGCGGGGAGCG1258930.20982223318669627No Hit
GTCCGCGGGGCTCCGGGGGCGGGGAGCGGGGCGTGGGCGGGAGGAGGGGA900890.1501487387349279No Hit
CACCAAGATCTGCACCTGCGGCGGCTCCACCCGGGCCCGCGCCCTAGGCT847280.14121371461036278No Hit
CTCCGACGCACACCACACGCGCGCGCGCGCGCGCCGCCCCCGCCGCTCCC700430.11673864852768435No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)