FastQCFastQC Report
Thu 29 Sep 2022
EGAF00006871331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006871331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59999819
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGATTTTCAAGGGCCAGCGAGAGCTCACCGGACGCCGCCGGAACCGCG1541140.2568574415199486No Hit
CCCGGATTTTCAAGGGCCAGCGAGAGCTCACCGGACGCCGCCGGAACCGC1489030.24817241532011955No Hit
CCACTCTCGACTGCCGGCGACGGCCGGGTATGGGCCCGACGCTCCAGCGC1231010.20516895225967266No Hit
CTCCTACTCGTCGCGGCGTAGCGTCCGCGGGGCTCCGGGGGCGGGGAGCG763410.1272353838267412No Hit
GTCCACTCTCGACTGCCGGCGACGGCCGGGTATGGGCCCGACGCTCCAGC745040.1241737079240189No Hit
GTCCGCGGGGCTCCGGGGGCGGGGAGCGGGGCGTGGGCGGGAGGAGGGGA655110.10918532937574361No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA631980.10533031774645854No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)