FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006900523

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006900523
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences183052508
Sequences flagged as poor quality0
Sequence length98
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCA7523360.4109946420400861No Hit
GTCCCACAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGG7313780.3995454681232775No Hit
GGAAGTCCCACAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACC6454910.35262614375105966No Hit
GCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACA6216270.33958944719839623No Hit
GCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTG5941930.32460249055970325No Hit
GCAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGACGCCTGAGCAG5625630.30732329545574977No Hit
CTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGA5418000.295980648350363No Hit
AAACAAAGCAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGACGCC4929050.2692697332505272No Hit
CCCACAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAG4766010.2603629992329851No Hit
CACAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAA4721940.2579554932948529No Hit
GCTACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAAAAGCTACAGC4563780.2493153494515355No Hit
GTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAG4550710.24860134666933928No Hit
GGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCA4468870.24413049833766823No Hit
GCCTGACGCCTGAGCAGTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTC4276080.23359854758176818No Hit
GCCAGCAGCTACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAAAAG4208820.2299241920247277No Hit
GTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATG4051630.2213370384414509No Hit
GCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCT3999830.21850724929701593No Hit
GCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTCATC3992090.21808441979937254No Hit
GTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTCATCCCTCA3942960.21540049044288428No Hit
ACAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAG3926490.21450074860487572No Hit
AGTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGC3850550.21035221216417316No Hit
AAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGAC3823240.2088602905129276No Hit
GGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCT3814500.20838283188122173No Hit
GGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACG3586680.19593722255911405No Hit
GGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTCATCCCTCACC3517080.19213503482836738No Hit
GCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAAC3515140.19202905430828623No Hit
GACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCT3439400.18789144369439614No Hit
AGACAGTGGCCCCTACAGAATGTTCATAGGTTCTCATCCCTCACCCCCCA3436240.18771881563075882No Hit
CTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAAAAGCTACAGCTGCCA3432870.18753471544896833No Hit
GCCTGAGCAGTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTCACGCATG3315670.18113218093684902No Hit
GGTTCTCATCCCTCACCCCCCACCACGGGAGACTAGAGCTGCAGGATCCC3310340.18084100765229616No Hit
CCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTAC3253960.1777610170738551No Hit
CACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTT3184650.17397467179198658No Hit
GGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTC3181160.17378401611410865No Hit
GAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGT3157770.1725062406683879No Hit
GGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAAT3062810.16731865809781749No Hit
GAGCAGTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTCACGCATGAAGG2979040.16274237553740592No Hit
GCAGCTACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAAAAGCTAC2933780.16026986092973933No Hit
GTCAAGGCGGGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAA2911860.1590723903110904No Hit
CGCCTGAGCAGTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTCACGCAT2883990.15754987634476988No Hit
GGCCCCTACAGAATGTTCATAGGTTCTCATCCCTCACCCCCCACCACGGG2860900.15628848963926786No Hit
GAATGTTCATAGGTTCTCATCCCTCACCCCCCACCACGGGAGACTAGAGC2843870.1553581554861843No Hit
CTGACGCCTGAGCAGTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTCAC2795310.15270536473611168No Hit
GAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAG2787320.1522688779549527No Hit
AAAGCAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGACGCCTGAG2725100.14886985323358695No Hit
GCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCAT2654930.1450365268964247No Hit
GAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTCATCCCTCACCCCC2622400.14325944116537317No Hit
CCACAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGA2481260.13554908518379874No Hit
CCAGCAGCTACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAAAAGC2464120.1346127418259683No Hit
AGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTCATCCCTCACCCC2458010.13427895781684673No Hit
GTGGCCCCTACAGAATGTTCATAGGTTCTCATCCCTCACCCCCCACCACG2437600.13316397719063208No Hit
GCGGCCAGCAGCTACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAA2435610.13305526521384783No Hit
ACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTACCT2424480.13244724295173274No Hit
CCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGACG2418010.13209379245434869No Hit
AAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACA2395130.13084387786699977No Hit
CATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATA2344780.12809330096695534No Hit
GACAGTGGCCCCTACAGAATGTTCATAGGTTCTCATCCCTCACCCCCCAC2313260.12637139066130684No Hit
GTTCATAGGTTCTCATCCCTCACCCCCCACCACGGGAGACTAGAGCTGCA2275240.12429439098425245No Hit
CATCCCTCACCCCCCACCACGGGAGACTAGAGCTGCAGGATCCCAGGGGA2229870.12181586717183904No Hit
CAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGACGCCTGAGCAGTGGA2226770.12164651685624543No Hit
GTACGCGGCCAGCAGCTACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCC2158120.1178962268028581No Hit
AAGCAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGACGCCTGAGC2136720.11672716333392165No Hit
CAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGACGCCTGAGCAGT2131400.1164365363407094No Hit
GGAGTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGC2115600.11557339602252267No Hit
ATAGGTTCTCATCCCTCACCCCCCACCACGGGAGACTAGAGCTGCAGGAT2112660.11541278636837907No Hit
CTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGG2095640.11448299850663614No Hit
GCAGTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGA2086780.11399898437884282No Hit
CATAGGTTCTCATCCCTCACCCCCCACCACGGGAGACTAGAGCTGCAGGA2081720.1137225609604868No Hit
CGGCCAGCAGCTACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAAA2078360.11353900707003699No Hit
CAAAGCAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGACGCCTGA2077810.11350896104630262No Hit
CGCGGCCAGCAGCTACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACA2063160.11270864423228771No Hit
ACCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAAAAGCTACAGCTGC2048970.11193345681994153No Hit
CCTGAGCAGTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTCACGCATGA2042350.1115718119524481No Hit
CTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTA2035200.11118121364390157No Hit
GAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTCATCCCTCACCC2003770.10946421996031871No Hit
ACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTGACGCCTGAGCAGTGG1975410.10791493771830757No Hit
GGCAGATAGCAGCCCCGTCAAGGCGGGAGTGGAGACCACCACACCCTCCA1945930.1063044708461465No Hit
CAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCC1915120.10462134722568238No Hit
CAAAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGA1914810.10460441219412302No Hit
ACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCC1893190.1034233303156928No Hit
TGACGCCTGAGCAGTGGAAGTCCCACAAAAGCTACAGCTGCCAGGTCACG1883240.1028797704317714No Hit
GCCCCTACAGAATGTTCATAGGTTCTCATCCCTCACCCCCCACCACGGGA1879650.10268365184048721No Hit
CCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTACCTG1874200.10238592305984685No Hit
ATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAG1845630.10082516869968261No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)