FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006952512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006952512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36393886
Sequences flagged as poor quality0
Sequence length68
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGG380400.10452305093223625No Hit
CTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAAAACCACGAGGAAGAGAGGTA365680.10047841552287107No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)