FastQCFastQC Report
Mon 19 Sep 2022
EGAF00006968694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006968694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115467518
Sequences flagged as poor quality0
Sequence length10
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAGATGCTC11371990598.48648950781119No Hit
CTAGATGCTC4852230.4202246730548066No Hit
ATAGATGCTA2608920.22594406160180908No Hit
ATATATGCTC2067860.17908586205169838No Hit
NTAGATGCTC1261730.10927142298148297No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)