FastQCFastQC Report
Thu 27 Oct 2022
EGAF00007019835

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007019835
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences355972574
Sequences flagged as poor quality0
Sequence length8
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTCCTT9564902726.869774242776355No Hit
TAGGTAAA8925354025.073150719751798No Hit
ACCAGTCC8392214923.57545359660208No Hit
GGACAGGG7982051922.423221570996645No Hit
ACCAGTCA8598670.24155428333644605No Hit
CTTTCCTA8573590.24084973467646975No Hit
GGACAGGA5180740.14553761661425074No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)