FastQCFastQC Report
Thu 27 Oct 2022
EGAF00007019867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007019867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences273366182
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAGCTGT7962875029.128968849555797No Hit
GCCAACAA6614441324.196267627573626No Hit
AGGCTACC6399844623.41125209116027No Hit
TATTGGTG5822979021.30102179208107No Hit
TATTGGTA4719340.1726380331858313No Hit
AGGCTACA3434750.1256464854164002No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)