FastQCFastQC Report
Thu 27 Oct 2022
EGAF00007019928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007019928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences604467157
Sequences flagged as poor quality0
Sequence length10
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTGACCTA60067804599.37314840746592No Hit
GTGTGACCTA7958160.13165578820686863No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)