FastQCFastQC Report
Thu 27 Oct 2022
EGAF00007019948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007019948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences589203552
Sequences flagged as poor quality0
Sequence length10
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTCTCCCG58349677799.03144253278364No Hit
GACTCTCCGG7698260.1306553562664198No Hit
GACTCTCCCN6554070.1112360911225464No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)