FastQCFastQC Report
Mon 19 Sep 2022
EGAF00007024190

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007024190
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25470359
Sequences flagged as poor quality0
Sequence length120
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1657940.6509291839977599No Hit
CCCCCGATTCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCC323820.12713601720336962No Hit
CCCCTGAACTCTACACAACATATTTTGTCACCAAGACCCTACTTCTAACC295990.11620959092096031No Hit
CTCCCCTGAACTCTACACAACATATTTTGTCACCAAGACCCTACTTCTAA282010.11072085791959195No Hit
CCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTC263420.10342217791276519No Hit
TCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTC262080.10289607618015906No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)