Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007040303 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 39066732 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT | 402434 | 1.0301194376842169 | Illumina Single End PCR Primer 1 (100% over 51bp) |
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 320823 | 0.8212179099086149 | Clontech SMART CDS Primer II A (100% over 26bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGG | 66585 | 0.17043913476049136 | Illumina Single End PCR Primer 1 (98% over 50bp) |
AAGCAGTGGTATCAACGCAGAGTAGGGTAAAACTAACCTGTCTCACGACGG | 45118 | 0.11548956795259967 | Clontech SMARTer II A Oligonucleotide (95% over 24bp) |