Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007040313 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 38069545 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT | 348420 | 0.9152197642498747 | Illumina Single End PCR Primer 1 (100% over 51bp) |
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 338683 | 0.8896428890862762 | Clontech SMART CDS Primer II A (100% over 26bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGG | 57471 | 0.15096319118077192 | Illumina Single End PCR Primer 1 (98% over 50bp) |