Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007040319 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 31621546 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 56 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT | 1060557 | 3.3539062258372816 | Illumina Single End PCR Primer 1 (100% over 51bp) |
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 360190 | 1.139065117183075 | Clontech SMART CDS Primer II A (100% over 26bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGG | 208512 | 0.6593984999974384 | Illumina Single End PCR Primer 1 (98% over 50bp) |
AAGCAGTGGTATCAACGCAGAGTAGGGTAAAACTAACCTGTCTCACGACGG | 36325 | 0.11487420634019602 | Clontech SMARTer II A Oligonucleotide (95% over 24bp) |