FastQCFastQC Report
Wed 28 Jun 2023
EGAF00007040358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007040358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences443219
Sequences flagged as poor quality0
Sequence length13-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG9610.21682283476114517No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA9100.20531610783833726No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA7350.16583224094634932No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)