FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007133884

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007133884
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55985795
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA900730.1608854531761137No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT737190.1316744720692097No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)