FastQCFastQC Report
Sat 25 May 2024
EGAF00007231848

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007231848
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128012960
Total Bases19.2 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAAGCTCATCAGTGGGGCCACGAGCTGAGTGCGTCCTGTCACTCCACT1501140.11726468945019315No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT1387190.10836324697124416No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)