FastQCFastQC Report
Sun 19 May 2024
EGAF00007231850

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007231850
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141095891
Total Bases21.1 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT2022950.14337412561504007No Hit
GGGAAGCTCATCAGTGGGGCCACGAGCTGAGTGCGTCCTGTCACTCCACT1836040.1301271062528674No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA1500470.1063439898473018No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)