FastQCFastQC Report
Sat 25 May 2024
EGAF00007246704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007246704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115604656
Total Bases17.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1860290.16091825920921385No Hit
CGGAGGGCGAGGCCCGCGGCGGCGCCGCCGCCGCCGCGCGCTTCCCTCCG1570530.13585352479228863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)