FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007246726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007246726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105896076
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT2568310.24253117745363859No Hit
CGGAGGGCGAGGCCCGCGGCGGCGCCGCCGCCGCCGCGCGCTTCCCTCCG2336060.2205992977492386No Hit
CGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGG1265780.11953039695257453No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)