FastQCFastQC Report
Wed 22 May 2024
EGAF00007246744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007246744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111948096
Total Bases16.7 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1834410.16386254572833467No Hit
CGGAGGGCGAGGCCCGCGGCGGCGCCGCCGCCGCCGCGCGCTTCCCTCCG1762560.157444392801464No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)