FastQCFastQC Report
Sat 25 May 2024
EGAF00007246756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007246756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102471531
Total Bases15.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1690960.16501754033517857No Hit
AGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGA1272940.12422377099059836No Hit
CGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCT1156950.11290452955172495No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)