FastQCFastQC Report
Thu 23 May 2024
EGAF00007246757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007246757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113390486
Total Bases17 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT2887960.25469156204163373No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC2328500.20535232559105535No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1852280.1633540930409276No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)