FastQCFastQC Report
Thu 23 May 2024
EGAF00007246763

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007246763
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106182820
Total Bases15.9 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT2855920.2689625308500942No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC2273960.21415517124144945No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1898580.17880293629421407No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)