FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007249813

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007249813
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences480151131
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATACGCAGTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT29773560.6200872616501241No Hit
ATATACGCAGTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA19232200.4005447193250493No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC9666730.20132681932597593No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGAAGCTATCTCGTATG5543610.11545552310695274TruSeq Adapter, Index 19 (97% over 37bp)
ATATACGCAGTGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC5495660.11445687920289414No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)