FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007249831

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007249831
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences483745946
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCTCGCGCATCTCGTATG66073671.3658754258583492TruSeq Adapter, Index 8 (97% over 35bp)
GCCACGCGTTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT12723330.26301677781915717No Hit
GCCACGCGTTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA5328420.11014914014390521No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)