FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007249837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007249837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431680541
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCATATGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT24613800.5701855344922764No Hit
AGCCATATGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15571460.36071720916417216No Hit
AGCCATATGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6568890.15217016696613156No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)