FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007249838

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007249838
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431680541
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCATATGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT19212540.4450638417820182No Hit
AGCCATATGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA16690110.38663104807404325No Hit
AGCCATATGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5639970.13065147636571367No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)