FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007249839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007249839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518836993
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGGCCTTCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT28714280.5534354794936528No Hit
AGCTGGCCTTCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA13205960.25453003887870423No Hit
AGCTGGCCTTCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC7848950.15127969103775912No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTATG7021760.13533653333774523TruSeq Adapter, Index 7 (97% over 34bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)