FastQCFastQC Report
Wed 16 Nov 2022
EGAF00007249875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007249875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500148992
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCATCAGCGCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT29495020.5897246714834926No Hit
TGCATCAGCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17529610.3504877602552481No Hit
TGCATCAGCGCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC8405000.16804992381150294No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)