FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007249876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007249876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500148992
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCATCAGCGCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT26348670.526816417136756No Hit
TGCATCAGCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA23397690.4678143987941897No Hit
TGCATCAGCGCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC8635070.17264995307638248No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)