FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007256299

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007256299
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431039483
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGGAGAATCTCGTATG33051280.7667808009133121TruSeq Adapter, Index 6 (97% over 35bp)
ATACCCAGCCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT20425720.4738712068286329No Hit
ATACCCAGCCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA12306050.285497048074364No Hit
ATACCCAGCCAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC7084510.1643587253467451No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)