FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007256311

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007256311
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486587689
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTAAGAGAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT18028740.3705136896712568No Hit
GGCTTAAGAGATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA11428560.23487154028674984No Hit
GGCTTAAGAGAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5176880.10639151209598317No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)