FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007256313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007256313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504417079
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTCGATATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT22902710.4540431114149488No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTATG21854840.43326923115543436TruSeq Adapter, Index 6 (97% over 35bp)
GTAGTCGATATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA14658460.2906019762268993No Hit
GTAGTCGATATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6941520.137614690084671No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)