FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007256315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007256315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences508856681
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTCGATATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT23598050.4637464905368905No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTATG22206490.4363996942392508TruSeq Adapter, Index 6 (97% over 35bp)
GTAGTCGATATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15020440.2951801668493766No Hit
GTAGTCGATATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC7062180.13878524668520564No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)