FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007256321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007256321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474258804
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGGATGTACGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT26992990.5691616006352515No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATTCAGAAATCTCGTATG26328140.5551428835467649TruSeq Adapter, Index 13 (97% over 37bp)
CCCGGATGTACTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15293910.3224802548947515No Hit
CCCGGATGTACGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC7843390.1653820642621112No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)