FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007256332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007256332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458805727
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACGAGCAGTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT12195690.26581381361004675No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTAAGATTAGTGTAGATCTC9378130.20440307189103593Illumina Single End PCR Primer 1 (96% over 31bp)
GCACGAGCAGTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA7836190.17079538329302502No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)