FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007256353

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007256353
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences508857034
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTATG66527641.3073935418960918TruSeq Adapter, Index 6 (97% over 35bp)
AGCGACTGTATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT26950160.5296214496270479No Hit
AGCGACTGTATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17605710.3459853912523493No Hit
AGCGACTGTATGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC6283040.12347358059709951No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)