FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007271879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007271879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73088815
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGATGACTACGCTACTCATGGGCCTGTTGAGAGCCGATCTAGTATCTC1906136326.079726425992817No Hit
CGAGATGACTACGCTACTCATGGCCTGGAATCGAGCCGATCTAGTATCTC68844869.419342754428293No Hit
CGAGATGACTACGCTACTCATGGCCAACACTAGAGCCGATCTAGTATCTC46046356.300054255907693No Hit
CGAGATGACTACGCTACTCATGGTCTACTGTCTCTTATACACATCTGACG44457646.082687207338086No Hit
CGAGATGACTACGCTACTCATGGTCGTGCCAAGAGCCGATCTAGTATCTC41552555.685213257322615No Hit
CGAGATGACTACGCTACTCATGGAACACCGTTGAGCCGATCTAGTATCTC39587275.416323961470712No Hit
CGAGATGACTACGCTACTCATGTATGCCTGTCTCTTATACACATCTGACG13729131.8784173748062547No Hit
CGAGATGACTACGCTACTCATGGCCTTAAGGTGAGCCGATCTAGTATCTC13163021.8009622949831654No Hit
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGTATCTC10671221.4600346167878082No Hit
CGAGATGACTACGCTACTCATGGAGTTCTGTCTCTTATACACATCTGACG8192031.1208322367793213No Hit
CGAGATGACTACGCTACTCATGGAACCGAACAGAGCCGATCTAGTATCTC7641451.0455019690769374No Hit
CGAGATGACTACGCTACTCATGGAACGGACGTGAGCCGATCTAGTATCTC6173140.8446080292860132No Hit
CGAGATGACTACGCTACTCATGGCCTTAGACCGAGCCGATCTAGTATCTC5776650.7903603307838551No Hit
CGAGATGACTACGCTACTCATGGCAGCCAGAAGAGCCGATCTAGTATCTC5169020.7072244911892469No Hit
CGAGATGACTACGCACCCTGTCTCTTATACACATCTGACGCTGCCGACGA4273620.5847160061358225No Hit
CGAGATGACTACGCTACTCATGGCAGTAACCTGAGCCGATCTAGTATCTC3832380.5243456197778005No Hit
CGAGATGACTCCAAGTAACGGTGCTGTCTGCTGGCTGGTGCAGGGCTCCT3672930.5025296962332745No Hit
CGAGATGACTACGCTACTCATGGGACTGACAAGAGCCGATCTAGTATCTC3131670.4284745894429948No Hit
CGAGATGACTACAAGTAACGGTGCTGTCTGCTGGCTGGTGCAGGGCTCCT2573660.3521277503267771No Hit
CGAGATGACTACGCTACTCATGGCCTCTATGCGAGCCGATCTAGTATCTC2047100.2800838951897086No Hit
CGAGATGACTACGCTACTCATGGAACGCCTCAGAGCCGATCTAGTATCTC1544780.21135655298283326No Hit
CGAGATGACTACACAACTCTGTCTCTTATACACATCTGACGCTGCCGACG1538380.21048090600456443No Hit
CGAGATGACTACGCTACTCTGTCTCTTATACACATCTGACGCTGCCGACG1414590.19354397796708017No Hit
CGAGATGACTACGCTACTCATGGGCCTGTTGAGAGCGATCTAGTATCTCA1289960.17649212126369815No Hit
CGAGATGACTACGCTACTCAGCTGTCTCTTATACACATCTGACGCTGCCG1180510.1615171897368975No Hit
CGAGATGCTCTCCTGCTTATGGGGATCAAGTAAGTCGACTACTGCGAGTA944140.129177084072303No Hit
CGAGATGACTACGCTACTCATGGGCCTGTTGAGAGCCGATCTGTATCTCA762170.10427997772299359No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG735300.10060362861266801No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)