FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007271887

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007271887
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107514047
Sequences flagged as poor quality0
Sequence length56-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGTATCTC3098117228.81592951291286No Hit
CGAGATGACTACGCTACTCATGGAACGGACGTGAGCCGATCTAGTATCTC103522509.628741814546334No Hit
CGAGATGACTACGCTACTCATGGCCAACACTAGAGCCGATCTAGTATCTC93334688.681161448605874No Hit
CGAGATGACTACGCTACTCATGGTCGTGCCAAGAGCCGATCTAGTATCTC74297226.910466313299509No Hit
CGAGATGACTACGCTACTCATGGCCTGGAATCGAGCCGATCTAGTATCTC67932826.318506455254168No Hit
CGAGATGACTACGCTACTCATGGCCTTAAGGTGAGCCGATCTAGTATCTC57429925.341620151271955No Hit
CGAGATGACTACGCTACTCATGGCAGTAACCTGAGCCGATCTAGTATCTC55510165.163061157952691No Hit
CGAGATGACTACGCTACTCATGGGCCTGTTGAGAGCCGATCTAGTATCTC30670052.8526551511915463No Hit
CGAGATGACTACGCTACTCATGGAACCGAACAGAGCCGATCTAGTATCTC25497452.3715459245990433No Hit
CGAGATGACTACGCTACTCATGGCCTCTATGCGAGCCGATCTAGTATCTC20933201.9470200019537913No Hit
CGAGATGACTACGCTACTCATGGAACACCGTTGAGCCGATCTAGTATCTC20434881.900670709567839No Hit
CGAGATGACTACGCTACTCATGGCCTTAGACCGAGCCGATCTAGTATCTC17942161.6688200752037547No Hit
CGAGATGACTACGCTACTCATGGCAGCCAGAAGAGCCGATCTAGTATCTC16429661.528140783315505No Hit
CGAGATGACTACGCTACTCATGGGACTGACAAGAGCCGATCTAGTATCTC16058761.4936429655559333No Hit
CGAGATGACTACGCTACTCATGGAACGCCTCAGAGCCGATCTAGTATCTC12740101.184970741544126No Hit
CGAGATGACTACGCTACTCATGGCAATGAGTGAGCCGATCTAGTATCTCA1420560.13212785116348563No Hit
CGAGATGACTACGCTACTCATGGGCATGAGTGAGCCGATCTAGTATCTCA1209600.11250622906976984No Hit
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTGTATCTCA1200990.11170540348090516No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)