FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007271898

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007271898
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97723576
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGATGACTACGCTACTCATGGCCTTAGACCGAGCCGATCTAGTATCTC3200634332.75191546408413No Hit
CGAGATGACTACGCTACTCATGGTCGTGCCAAGAGCCGATCTAGTATCTC1285854513.158078660568048No Hit
CGAGATGACTACGCTACTCATGGCCTGGAATCGAGCCGATCTAGTATCTC61610206.304538016496654No Hit
CGAGATGACTACGCTACTCATGGCCTTAAGGTGAGCCGATCTAGTATCTC54765215.604093939419491No Hit
CGAGATGACTACGCTACTCATGGCCAACACTAGAGCCGATCTAGTATCTC52741875.397046665586613No Hit
CGAGATGACTACGCTACTCATGGCAGTAACCTGAGCCGATCTAGTATCTC45561884.662322222019383No Hit
CGAGATGACTACGCTACTCATGGGCCTGTTGAGAGCCGATCTAGTATCTC40617134.15632866320815No Hit
CGAGATGACTACGCTACTCATGGCAGCCAGAAGAGCCGATCTAGTATCTC21926422.2437185475079215No Hit
CGAGATGACTACGCTACTCATGGAACACCGTTGAGCCGATCTAGTATCTC19489051.9943038105768869No Hit
CGAGATGACTACGCTACTCATGGAACCGAACAGAGCCGATCTAGTATCTC19377481.982886913593911No Hit
CGAGATGACTACGCTACTCATGGCCTCTATGCGAGCCGATCTAGTATCTC14033231.4360127386251194No Hit
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGTATCTC13557891.3873714568120183No Hit
CGAGATGACTACGCTACTCATGGAACGGACGTGAGCCGATCTAGTATCTC12866981.316671014986189No Hit
CGAGATGACTACGCTACTCATGGAACGCCTCAGAGCCGATCTAGTATCTC8777420.8981885804097058No Hit
CGAGATGACTACGCTACTCATGGGACTGACAAGAGCCGATCTAGTATCTC7793140.797467747189276No Hit
CGAGATGACTACGCTACTCATGGCCTGGAATCGAGCCGATCTAGTATTTC2044890.2092524735279847No Hit
CGAGATGACTACGCTACTCATGCCTTAGACCGAGCCGATCTAGTATCTCA1436680.14701467739985283No Hit
CGAGATGACTACGCTACTCATGGCCTTAGACGAGCCGATCTAGTATCTCA1233650.12623872871782751No Hit
CGAGATGACTACGCTACTTATGGCCTGGAATCGAGCCGATCTAGTATCTC993740.10168886983832846No Hit
CGAGATGACTACGCTACTCATGGCTTAGACCGAGCCGATCTAGTATCTCA980720.10035654037056524No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)