FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007271902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007271902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112983763
Sequences flagged as poor quality0
Sequence length45-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGTATCTC2045007918.1000158403292No Hit
CGAGATGACTACGCTACTCATGGCCTTAAGGTGAGCCGATCTAGTATCTC1167449110.332892700697178No Hit
CGAGATGACTACGCTACTCATGGGCCTGTTGAGAGCCGATCTAGTATCTC109397909.68262138693327No Hit
CGAGATGACTACGCTACTCATGGTCGTGCCAAGAGCCGATCTAGTATCTC72696736.434263479080618No Hit
CGAGATGACTACGCTACTCATGGCAGTAACCTGAGCCGATCTAGTATCTC69662926.165746134690168No Hit
CGAGATGACTACGCTACTCATGGCCTTAGACCGAGCCGATCTAGTATCTC62807485.558982842516937No Hit
CGAGATGACTACGCTACTCATGGCCTGGAATCGAGCCGATCTAGTATCTC52358444.634156148614027No Hit
CGAGATGACTACGCTACTCATGGCAGCCAGAAGAGCCGATCTAGTATCTC48841914.322914081025962No Hit
CGAGATGACTACGCTACTCATGGAACACCGTTGAGCCGATCTAGTATCTC48528144.295142833930925No Hit
CGAGATGACTACGCTACTCATGGCCTCTATGCGAGCCGATCTAGTATCTC42929493.7996158793188717No Hit
CGAGATGACTACGCTACTCATGGGACTGACAAGAGCCGATCTAGTATCTC41104033.6380475307766127No Hit
CGAGATGACTACGCTACTCATGGCCAACACTAGAGCCGATCTAGTATCTC35990783.185482501587418No Hit
CGAGATGACTACGCTACTCATGGAACCGAACAGAGCCGATCTAGTATCTC32553612.88126445213194No Hit
CGAGATGACTACGCTACTCATGGAACGCCTCAGAGCCGATCTAGTATCTC27861152.465942827554788No Hit
CGAGATGACTACGCTACTCATGGAACGGACGTGAGCCGATCTAGTATCTC11228390.9938056320535191No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)