FastQCFastQC Report
Thu 3 Nov 2022
EGAF00007271910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007271910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145894775
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGTATCTC3374965823.13287641726717No Hit
CGAGATGACTACGCTACTCATGGCAGCCAGAAGAGCCGATCTAGTATCTC3008775220.622912643718735No Hit
CGAGATGACTACGCTACTCATGGCCTGGAATCGAGCCGATCTAGTATCTC107494387.367938982050591No Hit
CGAGATGACTACGCTACTCATGGCCAACACTAGAGCCGATCTAGTATCTC84994235.825721311815314No Hit
CGAGATGACTACGCTACTCATGGGCCTGTTGAGAGCCGATCTAGTATCTC77994245.3459241429310955No Hit
CGAGATGACTACGCTACTCATGGAACACCGTTGAGCCGATCTAGTATCTC58166243.986862449323494No Hit
CGAGATGACTACGCTACTCATGGCAGTAACCTGAGCCGATCTAGTATCTC54126613.7099759055798947No Hit
CGAGATGACTACGCTACTCATGGGACTGACAAGAGCCGATCTAGTATCTC36304382.4883948037206953No Hit
CGAGATGACTACGCTACTCATGGCCTTAGACCGAGCCGATCTAGTATCTC33132752.2710031939115023No Hit
CGAGATGACTACGCTACTCATGGAACGCCTCAGAGCCGATCTAGTATCTC30218572.0712578637583148No Hit
CGAGATGACTACGCTACTCATGGTCGTGCCAAGAGCCGATCTAGTATCTC28456521.9504824624459647No Hit
CGAGATGACTACGCTACTCATGGCCTTAAGGTGAGCCGATCTAGTATCTC27236801.866879742609014No Hit
CGAGATGACTACGCTACTCATGGAACCGAACAGAGCCGATCTAGTATCTC20853791.429371956603655No Hit
CGAGATGACTACGCTACTCATGGCCTCTATGCGAGCCGATCTAGTATCTC18769691.2865224268655269No Hit
CGAGATGACTACGCTACTCATGGAACGGACGTGAGCCGATCTAGTATCTC17120471.1734806815391434No Hit
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGTATTCA2130440.14602579153365844No Hit
CGAGATGACTACGCTACTCATGGCAATGAGTGAGCCGATCTAGTATCTCA1940420.13300133606566786No Hit
CGAGATGACTACGCTACTCATGGCAGCCAGAAGAGCCGATCTAGTATCTA1917020.13139744038126108No Hit
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGTTCTCA1904440.1305351750945159No Hit
CGAGATGACTACGCTACTCATGAGCAATGAGTGAGCCGATCTAGTATCTC1903220.13045155318276477No Hit
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGTATCTA1873460.12841172687644228No Hit
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTGTATCTCA1848610.12670844449364277No Hit
CGAGATGACTACGCTACTCATGGCCTGGAATCGAGCCGATCTAGTATTTC1793380.12292283942313903No Hit
CGAGATGACTACGCTACTCATGGCAGCCAGAAGAGCCGATCTAGTATTCA1660160.11379160083011884No Hit
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGATCTCA1628660.11163251048572508No Hit
CGAGATGACTACGCTACTCATGGGCATGAGTGAGCCGATCTAGTATCTCA1535150.10522309657765332No Hit
CGAGATGACTACGCTACTCATGGGCAATGAGTGAGCCGATCTAGTACTCA1465800.10046967069245626No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)